YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47218632
Protein type:	Globular with Signal Peptide
Type Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSKVSYLYL LTVVCWASAL WYLSVSRSST SFTSQLTIPI RKLPKPSKNA TFSNIRTRSL  60
   61 NPHDFGYLIN EGKKCEAERP FLIILISTTH KEFDARQAIR ETWGDESTFA DVRVVTLFLL 120
  121 GAHTDNVLNQ MLEQESQIFH DIVVEDFIDS YHNLTLKTLM GMRWVATFCS KAQYVLKTDS 180
  181 DIFVNMETLI FNLLKPNTKP RRRYFTGYVI NGGPIRDMRS KWYMSRDLYP ESKYPPFCSG 240
  241 TGYVFSADVA ELIFNTSLHT RLLHLEDVYV GVCLRKLGIH PFQNSGFNHW KMAYSLCRYR 300
  301 RVVTVHQISP EEMHRIWNDM TSKKHLKC

Type	Start	End	Confidence
Signal Peptide	1	24	0.51
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	328	0.98