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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|69275230, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFAESRTEL LLYSAIAGLM ALTFIADLYF PLGTAIWVIY LFPIALCYLV SRPVVPVAAA  60
   61 TVVSFFVVIG FFYAPAGVDP DIARTNRVLG ALTSWIIALT GYFFIRNKLA IQKQEWLQAG 120
  121 QVHLARSVSG NQKIEELSGN ILAFLAEYLD AQAGALYVRR GSTFGRSGVY GVPAGAPIPD 180
  181 RFKPGDGLLG QAVADRRSFV LRDVPENYLY FGSGLGRAKP RHLLIAPASV DDEVNAVLEL 240
  241 GFLKEAGEEV GELLERISEP MAIALRSARY RAQLQELLEE TQRQAEELQT QSEELRSANE 300
  301 ELENQSRSLQ DSQVRLEEQQ AELEQSNAQL EEQTQLLEVQ RDELSRAQGA LQAKARDLEE 360
  361 ASRYKSEFLA NMSHELRTPL NSLLIMARLL ADNREGNLTS DQVKFAETIE TAGNDLLNLI 420
  421 NDILDISKIE AGHIELQIER VRVEPMLEKL RATFQSSASE KGLNFRIETV PGTPDRIESD 480
  481 PQRIEQVLKN FLSNAIKFTE KGEVVLSVAE EEDGRIAFAV RDTGIGIPED QQQAIFEAFR 540
  541 QADGSINRKY GGTGLGLSIS SELTRVLGGE IRVESTVGQG SSFILVVPKI YDAASVQKSA 600
  601 GAGRRTPVVS RAAPAAAESE AEKIDTVPAR PRIIEDDRDK LTGGRVILVV EDDPAFARIL 660
  661 MDLAHELGFE CLVAETADEG VLLARRYLPA GVILDIGLPD HTGLSVLDRI KHDVRTRHIP 720
  721 VHVVSVSDYT RTARSFGAAG YMLKPVKREE LERALTGLAK QLAQTVRRVL IVEDDATQLE 780
  781 ALQLLLSSQD VETIAAASAA ECFGKLKAET FDCMVLDLSL PDASGFEVLE QLSAEDAYSF 840
  841 PPTIVYTGRD LTPDEELRLR KFSKSIIIKG AKSPERLLDE VTLFLHQMVA ELPERKREML 900
  901 VRSLNRDAAL EGRRILVVED DIRNVYALMS VFEGHGAAVQ IARNGREALQ ALEKMADEGN 960
  961 PAIDLVLMDV MMPEMDGLTA TREIRKRERW KNLPIIVLTA KAMPGDQEQC LAAGANDYLA1020
 1021 KPLDVDKLLS LARVWMPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle