YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110635574, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADMRTPLNK VRGLGSARGG TEHFWRQRLT AVSNIPLIIF FIGFVAAYSG SSYEEIRAAL  60
   61 AQPVSALLMG LAFVSVLYHM RLGMQVIIED YVHGEGWKIA LILLNTFFPV IVGAIALYSL 120
  121 LRIAFGG

Type	Start	End	Confidence
Cytoplasmic	1	28	0.89
Transmembrane Helix	29	50	0.90
Non-Cytoplasmic	51	58	0.76
Transmembrane Helix	59	80	0.93
Cytoplasmic	81	98	0.84
Transmembrane Helix	99	121	0.91
Non-Cytoplasmic	122	127	0.74