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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68191704, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKRTDIKSI LIIGAGPIVI GQACEFDYSG TQACKALRAE GFRVILVNSN PATIMTDPEL  60
   61 ADATYIEPIT PEVVAKIIAK ERPDALLPTM GGQTALNTAL SLRRMGVLER YGVEMIGANA 120
  121 EAIDKAEDRA LFREAMAKIG LETPKSMLAN ATEVKDADRK KHEVERAELR AKHTGPELDA 180
  181 ALDALEAEWQ RGEGDRKQRY INHAMAIAAQ ALDVVGLPAI IRPSFTLGGT GGGIAYNRTE 240
  241 FFDIVSSGLD ASPTTEVLIE ESVLGWKEYE MEVVRDKADN CIIVCSIENL DPMGVHTGDS 300
  301 ITVAPALTLT DKEYQIMRNA SIAVLREIGV ETGGSNVQFA VNPADGRMVV IEMNPRVSRS 360
  361 SALASKATGF PIAKVAAKLA IGYTLDELEN DITGGATPAS FEPSIDYVVT KIPRFAFEKF 420
  421 AGSDPVLTTA MKSVGEVMAI GRTFAESLQK ALRGLETGLT GLDEIEIPGL GDNGPDDKNA 480
  481 IRAALGTPTP DRLRMVAQAI RMGTSVADVH AMCHIDPWFL EQIAAIVAME ERIREHGLPQ 540
  541 DASNLRMLKG MGFSDSRLAS LVKKDAEEVR RIRESLGVHP VFKRIDTCAA EFAAPTAYMY 600
  601 STYETPFAGA PADEARVSDR RKVVILGGGP NRIGQGIEFD YCCCHAAFAL ADAGFESIMI 660
  661 NCNPETVSTD YDTSDRLYFE PLTPEDVLEI LRAEQQEGEL VGVIVQFGGQ TPLKLADALE 720
  721 KAGIPILGTA PDMIDLAEDR DRFQKLLQKL GLKQPKNGIA YSVEQARVVA GELGFPLVVR 780
  781 PSYVLGGRAM QIVWDDARLQ TYLLDTVPGL VPEEIRQKYP ADKTGQINTL LSKNPLLFDT 840
  841 YLSEAIEVDV DCLSDGKEVF VCGIMEHIEE AGIHSGDSAC SLPVHSLSPE IVSELERQTT 900
  901 ALAKALNVGG LMNVQYAVKN GDVYVLEVNP RASRTVPFVA KTIGRPIAKI AARVMAGETL 960
  961 EQAFTTYGSL PNANDLGHIA VKEAVFPFAR FPGVDILLGP EMKSTGEVMG LDRDYALAFA1020
 1021 KAQLGAGVDL PRSGTLFVSV RDEDKARVLP AVKRLSDLGF RILATGGTAR FLRENGVEAE1080
 1081 KINKVLEGRP HIEDAIRNRQ VQLVFNTTDG QKAVSDSKSL RRATLMQKVP YYTTMAGANA1140
 1141 VVEAIAALKA GSLEVRPLQG YF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle