YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|69278498, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRAALAFAL AFAGATHAQA QSQPPTDQQA QPQQGTQQQN QTRPSGPLQQ KLVPGMARYT  60
   61 DEVLFGEIWP GEGLSPRDRS LAVISVLIAT NKPAQLRGHL GRALTNGVTP MEASGVLTHL 120
  121 AIYSGWPNAV SALEVYDEVY TERDVDFAAL QAELEPLSSS SETDDAANAQ LEAVAPKFAD 180
  181 LTDRIVHGDL WSRPDLSVRD RSLVTIAALT GTGDIDLMEP YLRRGIEAGL TRDEIAEALT 240
  241 HLAFYAGWGK ATKALTVVTE TLGG

Type	Start	End	Confidence
Signal Peptide	1	20	0.98
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	264	0.99