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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45681510, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSKTVSADS GSLLSTLANL WPYIWPSSRP DLKARVAIAG VFLLLAEVVL VLVPFFYKWA  60
   61 TNTLSGSSAL PAYLPAFLAA PLMLVVAYNL MRITNIGLEQ FNSALFARVG QNAVRQLAHR 120
  121 TFVHMHSLSL RFHLERKTGG LSRIIERGVK GIEAIVRLAL LSAVPTVIEF SLVAIIFALN 180
  181 YGWQYVAIMA VTVWLYVWFT IKASDWRIHI RRQMNESDTE ANTKAIDSLL NFETVKYFNN 240
  241 EAMEARRFDA SMARYEEAAT RTWTSLGWLN FGQGVIFGLG MMASMGLSAW EVTRGTQTVG 300
  301 DFVFINAMLM QLSVPLNFIG FMYREIRQGL TDIEQMFDLL DVPPEVKDKP GAGPLKVGEG 360
  361 RVQFENVSFA YDANRPILKG ISFEIPAGKT VAVVGPSGAG KSTISRLLFR FYDINQGQIL 420
  421 IDGQNIQDVT QESLRAAIGM VPQDTVLFND TIAYNIRYGR PDASDEEMRR AAELAQIGAF 480
  481 VESLPNGYDS MVGERGLKLS GGEKQRVAIA RTILKAPPIL ILDEATSALD THTEQEIQAA 540
  541 LDLVSKGRTT LVIAHRLSTV IGADEIIVLK DGRISERGTH RTLLKAGGLY ADMWARQREA 600
  601 SEAEERLRRA RESDEMGVVA RGVPAY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle