YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68189865, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLYLINILL ALVWTAITGS FSLANMVLGF LLGSFALYLI REQVGSLGYF RRGVKIFSLA  60
   61 VLFLYELVLS ASRVAKLVLS PKMHLKPGIF SYPLTVDRDF EITLLANLIT LTPGTLSVDV 120
  121 SEDRKTLFVH ALDCSDVEAL RSDIAEGFER KIMEAFR

Type	Start	End	Confidence
Cytoplasmic	1	9	0.56
Transmembrane Helix	10	37	0.76
Non-Cytoplasmic	38	52	0.62
Transmembrane Helix	53	75	0.72
Cytoplasmic	76	157	0.63