YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110633223, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPILALTVA IFFSVSIYLM LSKHIIRILL GVSIFGNAVN LTIFTSGRVV REIPPIIPLD  60
   61 LSVPDGITAN PLPQALILTA IVISFSFFAF LLVLAFRTYQ ELGTDDTDGM RVAEPKGEEL 120
  121 PPLGY

Type	Start	End	Confidence
Non-Cytoplasmic	1	3	0.52
Transmembrane Helix	4	22	0.67
Cytoplasmic	23	27	0.54
Transmembrane Helix	28	47	0.71
Non-Cytoplasmic	48	74	0.82
Transmembrane Helix	75	94	0.96
Cytoplasmic	95	125	0.88