YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47217580
Protein type:	Transmembrane
Type Confidence:	0.77
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVGQLARV LLRSAVTQSR RQFSAAAAEH GEHSAKTWKI LSFVVALPGV AVCMLNTFLK  60
   61 EQSHSHEQPE FVPYSHLRIR SKRFPWGDGT RTLFHNPHVN PLPDGYEG

Type	Start	End	Confidence
Cytoplasmic	1	39	0.66
Transmembrane Helix	40	59	0.74
Non-Cytoplasmic	60	108	0.90