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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47217441
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDFADEEEVQ SFGYKRFGPS GEYWVLNSHG RSSWHRLLSA VGIQEGTQCT KCKNEWALKT  60
   61 SIALLYVLCT LLTIAVAVLG YKVVQRVDTV SEGIENYGGK IIAVETDLKK LDDQAGENSE 120
  121 NTTTEIQAFK NNILTLQRQL SEVEEHIHND QVKLSQLEDT GSDIQSNQGS ILGRLDSNTA 180
  181 TLHSINGTLQ FHGSVIGSLQ DDTMRLQREL QQQVKLQDQA LLSISSLNVT QAQQRSLITI 240
  241 LQRSLDDASQ AIQKMRNDFQ SLEQTARQTR TDAEWLRGKV ENLQVVANNV SALAKANNDS 300
  301 LEEVGSQLAV MAGEIQNTSS LAETHDQTLR EILDQQRDFS NLTTGKFERL EVRLEESEES 360
  361 IDHMTETISF TTHMLGSINL KLNELRTSSE TVSRHSDFLL SLNNSMTDVQ TDAASLRAQQ 420
  421 EELASRLDKE VTNLSFVMEE MKLVDTKHSQ LITNFTILKG PPGPRGPKGD KGSRGIPGQS 480
  481 GQKGDKGEKG APGIQGPRGE QGIPGAPGLP GLKGLPGVPG SPGPKGSRGS GGRAGPPGAK 540
  541 GEPGSAGLPG RDGQPGPQGA QGPPGIRGAT GPPGEQGPRG LPGPVGPPGP PGPPGLPGVP 600
  601 IRGPVAPVGL ASMQDEAVAP SQWARGCPLE WLNYRDKCYF FSKDLHSFDD AKTTCDSLSA 660
  661 SLLVINDKEE QKWLRKQVQG KGYFWIGLTD KEEENVWRWL DGTQPAFTYV LTPLPPAACL 720
  721 SNRNINDALF TCRMWKPGQP DNWGHGHDIS GEDCAGLVHE ALWNDFFCED LISYICEKEP 780
  781 E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle