YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|108802913, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVDRAIYVD GKRAELSGAA EDTYAACRRR GGMAWIGLYE PDEAEFSSVA EEFGLHPLAV  60
   61 EDAVHAHQRP KLEKYGDTYF VVLKTARYVD ETETVEFGEI HVFVGEDFVV TVRHGEASAL 120
  121 RGVRERLEGD RELLRRGPAS ILYAIMDRVV DDYGPVVDGL ENDIDEIESE VFGGSPHVSR 180
  181 RIYELSREVV EFHRATRPLA GVLERMLSDG GPPLDVELKR YMRDVHDHAI RTNEQIEGFR 240
  241 ELISNILNVN LTLVSVEQND EVKRISAWAA ILFAPTVIAG IYGMNFDRMP ELHWDFGYPF 300
  301 ALALMLGVSG VLYALFRRRG WL

Type	Start	End	Confidence
Cytoplasmic	1	264	0.91
Transmembrane Helix	265	286	0.89
Non-Cytoplasmic	287	295	0.84
Transmembrane Helix	296	316	0.95
Cytoplasmic	317	322	0.85