YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47216891
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWAVGAIVVV VLALVACLGF CVYKKCCNKG KKPKKARERK AGRGRRKKDK DGEEGGDEKK  60
   61 EGEEGKEEEE KEFFGKLEYT LDYNFTDNQL IVGILQAQDL AAMDMGGTSD PYVKVYMLPD 120
  121 KKKKFETKVQ RKNLCPVFNE TFTFKIPYSE LGGQTLVLQV FDFDRFGKHD LIGEIKIPMN 180
  181 TIDLGQPIHE WKDLAGGEKE EQEKLGDICI SLRYVPTAGK LTVNIMEAKN LKKMDVGGLS 240
  241 DPFVKVVLQH NGKRLKKKKT SVKQNTLNPY FNESFSFEIP FSQIQKVQVL ITVYDYDKLG 300
  301 SNDPIGKCWI GYGATGVGLR HWSDMLANPR RPVAQWHTLQ PEEEVDAAL

Type	Start	End	Confidence
Signal Peptide	1	19	0.98
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	349	0.98