YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45545541, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKELVNVPPN GQVELSNEEI ARYSRHLIMP EVALEGQKKL KAARVLTIGA GGLGAPLAMY  60
   61 LAAAGVGTIG IVDFDVVDES NLQRQIIHGT SDIGRPKLES ARETIEDINP NVRVETFNEA 120
  121 LSSENALDIF RDFDVIVDGT DNFPTRYLVN DACVLTGKPN VYGSIFRFEG QASVFWAEEG 180
  181 PCYRCLYPEP PPPGLVPSCA EGGVLGILPG AIGVIQATET VKLILGIGEP LIGRLLLYDA 240
  241 LGMRFREMKL RKDPKCPICG ENRTIHELID YEEFCGIPQA QAAERENEVP EITVRELKER 300
  301 LDRGEDIKVL DVREPHEYQV ANIGAPLIPL NELPERMHEL NQNDEIAVHC KTGGRSARAV 360
  361 KLLRDAGFTN VYNVKGGITA WSEEIDPSVP KY

Type	Start	End	Confidence
Cytoplasmic	1	44	0.81
Transmembrane Helix	45	67	0.72
Non-Cytoplasmic	68	392	0.95