YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47216368
Protein type:	Globular with Signal Peptide
Type Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAQRCVSG TSGGAGTRWA AAALLWISVC GIASTHPAMS RTNATLLEKK WESLFSRSYL  60
   61 GITGGKPELN WESDYLQGIR RVRRLYCNVG IGFHLQVLPD GTVSGAHSES PHSLLEISAV 120
  121 DRGVISLFGV RSAMFVAMNS RGRLYGTSVF VDECKFRETL LPNNYNAYES FVYKGFYVAL 180
  181 SKNGRAKRGN RATTAMTVTH FLPRL

Type	Start	End	Confidence
Signal Peptide	1	37	0.74
N-region	1	28
H-region	29	34
C-region	35	37
Cleavage Site	37	38
Non-Cytoplasmic	38	205	0.91