YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75700879, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPQESDTKQ ASTPSKAWRG WQENLTLIAI ALCLALLIRT FIAEPRYIPS ESMVPTLYEG  60
   61 DRLVVEKVSY NFQQPTTGDI VVFQPPAELQ RRGYPKDQAF IKRVIATPGE IISVNNGKVY 120
  121 LNGKALPEDY IAEPPNQPFP PVKVPDNQFF VMGDNRNNSN DSRYWGFLPK ENIIGRAVFR 180
  181 FWPLDRLGII

Type	Start	End	Confidence
Cytoplasmic	1	23	0.68
Transmembrane Helix	24	43	0.89
Non-Cytoplasmic	44	190	0.80