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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|53765674, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSANSLPESS TTWHSLEVDK ALGLLNSNAD SGLTTEEVEQ RLQKYGPNEL EEHGGRSAWE  60
   61 ILFDQFKNIM LLMLIAVAFI SGSLDFISWQ AGELKPGEIP FKDTIAILAI VILNGILGYV 120
  121 QESRAEQALA ALKKLASPSV RVIRGSKLVD VAAKDIVPGD VMLLEAGVQI SADGRLIEQA 180
  181 NLQVRESALT GEAEAVNKQA SLQLPEDTSL GDRINVVYQG TEVVQGRGKV LVTNTGMTTE 240
  241 LGKIATMLQS VESEPTPLQQ RMTQLGNVLV SGSLVLVAIV VVGGVIQAGN FSPLRDLLEV 300
  301 SLSMAVAVVP EGLPAVITVT LALGTQRMVR RNALIRKLPA VETLGSVTTI CSDKTGTLTQ 360
  361 NKMVVQSIYT NHQTFRVTGE GYAPVGEFHL DGQNVQAEDY PEIPALLVAC AVCNDSVLQK 420
  421 EAGEWMILGD PTEGALVTLA GKAGIEKDQW NYKLPRVSEF PFSSERKRMS VISQVEKVAT 480
  481 GEPTMTAVDP TLAGLVNSEP YIMFTKGSPE LILARCTAIH LGANSDHLND EQRQQILAAN 540
  541 DQMASKGLRV LGFAYKPLAE VPPEGSDETS EQGMVWLGLV GMLDAPRPEV RAAVQECREA 600
  601 GIRPIMITGD HQLTARAIAT DLGIAQEGDR VLTGQELQRM NDQELEQQVD LVSIYARVSP 660
  661 EHKLRIVQAL QRRGRFVAMT GDGVNDAPAL KQADIGIAMG ITGTDVSKEA SDMVLLDDNF 720
  721 ATIVTATKEG RVVYTNIRRF IKYILGSNIG EVLTIAAAPL LGLGGVPLTP LQILWMNLVT 780
  781 DGLPALALAV EPPEPDVMKR PPFSPRESIF ARGLGSYMVR IGIIFAIITI ILMKWAYDHS 840
  841 HAVTGPGLDP ERWKTMVFTS LCIAQMGHAI AIRSNNQLTI EMNPVSNPYV LGAVVVTTIL 900
  901 QLMLVYVPPL RDFFGTHWLP LDELAICVGF SALMFVWVEM EKLFFRFMGK RSV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle