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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47216268
Protein type: Transmembrane
Type Confidence: 0.76
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVSVFPGVR LLSIGDANGD IQRHSEQQPL RLEVKSTQDA ALINLSNGEE ASVFKCSVSR  60
   61 ETECSRVGKQ SFIITLGCNS VLLQFSSPAD FQSFYNILKN CRGHHGERSV FSDRTEESSA 120
  121 VQYFQFYGYL SQQQNMMQDY VRTGTYQRAI LQNHGDFKDK SQAGARKVYA VEASTMAQHA 180
  181 EVLVNSNRLG ERVAVIPGKV EEVTLPEQVD IIISEPMGYM LFNERMLESY LHAKKFLKPN 240
  241 GKMFPTIGDV HLAPFTDEQL YMEQFTKANF WYQPSFHGVD LSALRGAAVD EYFRQPIVDT 300
  301 FDIRILMAKS VKHTVNFLEA KEDDLYRIEI PFKFHMMHSG LVHGLAFWFD VAFMGSAMTI 360
  361 WLSTAPTEPL THWYQVRCLL QSPLFTKAGD TLSGTALLVA NRRQSYDISI VAQVDQTGSK 420
  421 SSNLLDLKNP FFSMSQGMAV SGENTRMPAA YDLSTVIGSG QPASHNNLIP LVNTGIVNHT 480
  481 HSRMGSIMST GIVQGSTTGQ SGSSGTYYPV TNQFSMGGAA ISMASPMVIP SNTMHYGS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle