YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75700738, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAESEMRSP TVGGRSSSTV SGMPSVAPTL YGIANTIRLT GWIILWVQLG LAVVTGLVLL  60
   61 FASTGRGFTD QPNAGLGIGI FWAVCGLIAL LFSVYWDFRY TRIGKHLANP NPALHPSKAD 120
  121 TSAAIRLGII VSLAGILLTL VGAGATLGVL IAKSISQPPG VAITDPNKII RALDVFVMVA 180
  181 NINGISAHFV GAIASIWLLE RVHQH

Type	Start	End	Confidence
Cytoplasmic	1	41	0.77
Transmembrane Helix	42	64	0.90
Non-Cytoplasmic	65	73	0.77
Transmembrane Helix	74	96	0.90
Cytoplasmic	97	126	0.80
Transmembrane Helix	127	151	0.88
Non-Cytoplasmic	152	175	0.80
Transmembrane Helix	176	199	0.83
Cytoplasmic	200	205	0.77