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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|53764618, gi|...
Protein type: Transmembrane
Type Confidence: 0.82
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVSNTKPSL QRQIKTMIRS SVQTAQKLPL RLILVVPFVL QIFTAVSLVG YLSFKNGQKA  60
   61 VNELADQLIV KVNGLVDQHL DTYLAVPRQI NQINVDATNL GMLNLENFQT TGRYFWQQMQ 120
  121 VFNVGYISFA NPQREFIGVE RLDKGSLLIN EVSQEKGIGK LYVYNTNNQG DRQQLIAVKD 180
  181 YNPHVEAWYA DAVKVGKPIW SQIYSWEDKP EVLSISASYP INDSNNKFVG VISVDLILSQ 240
  241 INSFLANLKV GQTGQIFILE RSGMIVASST SEAPYKVISG KAQRLSAHQS QNYLLRETTD 300
  301 YLQQKFGQLK NVKSYQETVL QLRHERHFVQ VRPWKDKLGL DWLVIVVVPE SDFMAQINTN 360
  361 NRTTVLLCLG ALIIATAMGV YTSRWIARPV VQLTQASSAI ASGNLDQEVT ISGLKELSML 420
  421 ATSFNQMAGQ LRDSFAELEK TNQELENRVA ERTAEITAAK ETADAANRAK SEFLANMSHE 480
  481 LRTPLNGILG YAQILQMDSN TSDEQMQGLN TIYECGSHLL TLINDILDIA KIEAKKLELY 540
  541 PKEFDLRKLL LGACEMCRIK ADQKELIFKY HLNNRIPANI FADEKRIRQV LINILSNAIK 600
  601 FTDHGTVTFD VEVVACTGTK LITNTNQLLP VHQLRFHIED TGIGMTDEQL KKIFLPFEQV 660
  661 GDNLHKSEGT GLGLAISSQI LELMGSDLKV ESVYGKGTKF WFDLDLPIVD TGKFSLSVEG 720
  721 QKNIIGYEGK TRSILIIDSS WENRSIFANL LSSLGFKLIE VSNLQESLDK IKTEHPDLII 780
  781 ADIAMPEINN LQATKKMRSQ VEFANLVIIA SSASVSEYTR QQSQEAGYDD FLAKPVKVEE 840
  841 LFNMLQTYLS LKWIYSLNDD SSAKISTTEE IIFPPPTELF NLYQAAKAGY VVGIQEEIIR 900
  901 IQQLDKRYTR FAVKVSELIA EFEDEAIVAM IQPHLSY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle