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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4929183, gi|1...
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEDTAEGLQ NQCSEQSSDP PSAELQNEES MPETQDEEET THGITGLAIT CCVCLEADRL  60
   61 RICLNSEKIC IIPILACLIS LCLCIAGLKW VFVDKIFEYD SPTHLDPGHR GQDLILYTDT 120
  121 APSTLVPSSV RTLPVIIPTT DSKAAVTFKF GTSLLPTEPT YNHLLLMKIY LKVTSVEKSV 180
  181 EPSTLNLLES QKEVIFATTK RGDTTAGPGH LIKCSDKEKT YCVNGGECYV LNGITSSNQF 240
  241 MCKCPNEFTG DRCQNYVMAS FYKAEELYQK RVLTITGICI DLLVVGDMCV VDAYCKTKKQ 300
  301 RKKLNDRLRQ SLRERNKNIT NKDNRPHNPK NPPPRKNVQL VNQYVSKNVI SSEHVIERET 360
  361 ETSFSTSHYT STTHHSTTVT QTPSHSWSNG LSESMISEKS YSVIVTSSVE NSRHTSPTGP 420
  421 RGRLNGIGGP RDCSYLRHAR DTPDSYRDSP HSERYVSAMT TPARMSPVEF KTPISPKSPC 480
  481 LETSPPESSL AVSVPSVAVS PFIEEERPLL LVSPPRLREK RYDRKTPQKT PHKQHNSYHH 540
  541 NPGHDSSSLP PNPLRIVEDE EYETTQEYEP SLEPAKKLVN SRRQKRTKPN GHISNRLELD 600
  601 SDSSSESSTS ESETEDERIG EETPFLSIQN PLAASLESAS LYRHADSRTN PTSRFSTQEE 660
  661 LQARLSSIAN QALCDQKKRK MTCKTLFI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle