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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|53764466, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNFFKQTLA SLLGTLLGLF LFAGAGTTGL LLLLFAAASS SNTSPVVKDK SVVVLDLSMN  60
   61 ITDREPSAGE ELQNRFSGVT QERMTLRNVI DSLEKAQRDK RIVAIYLDGS RGGNNLGFAS 120
  121 LKEIRKALEE FRKSGKKVIA YGVSWNEREY YLSSVADTIA LNPLGGLEIN GLSSQPMFVA 180
  181 GALQKYGIGV QVVRAGKFKG AVEPFVLNKL SPENREQTQK LLDDVWGEWR TTVGNSRKIN 240
  241 PQKLQAIADN QSLLEPTEAK TNGLVDQVAY NDQVVADLKK LTGSDKKDNT FTQISLRRYA 300
  301 QVPGQSLGVA RNSKNKIAVV YAEGDIVDGK GDDGQIGGDR FARIFNKIRQ DENVKAVVLR 360
  361 INSPGGSATA SEVMQREIRL TRESKPVVVS MGDYAASGGY WIATDSNRIF AEPNTITGSI 420
  421 GVFGVLFNGQ KLANDNGITW DAVKTARYAD SQTVARPKSP QEIAIYQRSV DRIYNMFVNK 480
  481 VAQGRKLPTQ KVAQIAQGRV WSGVTAKQIG LVDEIGGLNA AIEYAAKAAK LGKDWQLREY 540
  541 PRESSFEERF FGGVVEEIST TLGIEKLDVK PNDPLTVQIR KIQQEISVLQ TMNDPQGVYA 600
  601 RLPVNLKIE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle