YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|53764140, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNTKNLTEI DAITLKQWIE ENTVLLIDVR EAAEYAAEHI PDAKLLPLSN FTADQVTPQC  60
   61 ENIVLYCRSG NRSHQAVQKL IDAGVSNVYQ LQGGLPTWKA AGLPTKVNLS APISLMRQVQ 120
  121 IVAGSLVFLG TVLGAFVSPW FLILSGFVGG GLVFAGVTNT CAMGNLLAKL PYNRRMA

Type	Start	End	Confidence
Cytoplasmic	1	118	0.99
Transmembrane Helix	119	143	0.84
Non-Cytoplasmic	144	146	0.69
Transmembrane Helix	147	168	0.88
Cytoplasmic	169	177	0.86