YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46134870, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAHRGSAVL SSATFKMQPT ATGLTENHRL RLFSGSSNVQ LSQEVARYLG MDLGPMIRKR  60
   61 FADGELYVQI QESIRGCDVY LIQPCCQPVN DHLMELLIMV DACRRASARQ VTAVIPYYGY 120
  121 ARADRKTAGR ESITAKLVAN LITQAGANRV LAMDLHAAQI QGYFDIPFDH VYGSPVLLDY 180
  181 LTSKQLHDLV VVSPDVGGVA RARAFAKKLN DAPLAIIDKR RQAHNVAEVL NVIGDVKGKT 240
  241 AVLVDDMIDT GGTIAAGAKL LREEGARQVY ACATHAVFSP PAVERLSSGL FEEVIVTNTI 300
  301 PIPESDRFPQ LVVLSVANLL GETIWRIHED TSISSMFR

Type	Start	End	Confidence
Signal Peptide	1	23	0.59
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	338	0.99