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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47215203
Protein type: Transmembrane
Type Confidence: 0.69
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QVLLHVLFEH AAGYALFAVK EVEEIGMLLP QVEESVLNIG KFNSMVSLAA FFPFKSAQAA  60
   61 LENMNAVSEG VVHADLKLFL ETNLPVSGKK KATLGVSDAK IGAALQEEFN LSIQTGGVVA 120
  121 EISRGLRLHF HSLVKGLTAL AASKAQLGLG HSYSRAKVKF NVNRADNMII QSIALLDQLD 180
  181 KDINTFSMRV REWYGYHFPE LIKIVSDNSV YCRLARLIGN RKELTEESLQ SLEEVVMDGA 240
  241 KARTILDAAR SSMGMDISPI DLINIERFSD RVVSLAGYRL ELQEYLRSKM SQVAPNLAAL 300
  301 IGEVVGARLI SHAGSLTNLA KYPASTVQIL GAEKALFRYW GAPALLGSAV AAVMAGLGRS 360
  361 RAGALKTRGN TPKYGLIFHS TFIGRAAAKN KGRISRYLAN KCTIASRIDC FSELPTSVFG 420
  421 DKLREQVEER LSFYETGAVP RKNVDVMQEA VKEVRNAFPR CRLSRRCYGR RSPRSNGSWR 480
  481 RRRRSAGSGR SCSNRRTVTP RPRWAWTEEK RTPRRRRRKR RSRPRKTRPQ QRRRPPRRRP 540
  541 RGRRKRSGKL KRRRRRRKRR Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle