YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TRPF_ANAVT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVKICGITQ PQQSVAIASL GATALGFICV PSSPRYVTAA QIWAAVAPLP KNIDKIGVFA  60
   61 NSSIAEIKQT VIDCGLTGVQ LHGDETPEFC DQLRRSLPQV EILKALRVRS LEHLEQAIIY 120
  121 TQYINTLLLD AYHPQQLGGT GQTLDWQMLH KFHPSCPWLL AGGLTPDNIL EALSQLNPDG 180
  181 IDLSSGVERK PGDKDLDKVA LLFEKLGSRN

Type	Start	End	Confidence
Signal Peptide	1	39	0.88
N-region	1	30
H-region	31	36
C-region	37	39
Cleavage Site	39	40
Non-Cytoplasmic	40	210	0.99