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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46130086, gi|...
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHGVPIARRL MTEDGSLVYD PEAIARYYLN RPFAVWSRFL EILWPLFSFI FGLWFDARTG  60
   61 ASRRNQNQRA VQLRDLLTEL GPAFIKVGQA LSTRPDLVPP AYLEELTRLQ DQLPAFPNAI 120
  121 AFEFIEAELG VPPEAIFAEL SDNPVSAASL GQVYRGRLHT GEEVAVKVQR PGLAERIALD 180
  181 LYILRGLAAW AMRNVRRVKS NLVAIADEFG LRIFEELDYR QEADNAERFA ELYGQLPDIY 240
  241 VPSIYRQYTS RRVLTMEWIQ GTKLTELQAI RNQGIDPAYL IERGVQCSLR QLLEYGFFHA 300
  301 DPHPGNLLAT PDGQLAYLDF GMMSQVEDYQ RYGLIEAVVH LVNRDFQGLA RDYVKLEFLT 360
  361 PDTDLTPIIP ALAGVFKDAM GASVADLNFK SITDQLSQVM YDYPFRVPAY YALIIRSLVT 420
  421 LEGIAINVDP NFKVLSKAYP FIARQILTDP SPDLRASLRE LLFNGGQLRW NRLENLLRNA 480
  481 SNSSDYDSEH LIQQTVDFLL SESGQDLRDR LVEELVNSLD RLGRGALPLL RNQIRQRLGM 540
  541 DPEPDSTLTD LQPLLRVLSL LQQGQRFEPQ RFIPLIPVLG RPEVQQMGQQ VVTGLAQKAL 600
  601 VRFIREVVVG DRRNNAIAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle