YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|53762885, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRWIDMTMD RLGYWGIGLL MFLENLFPPI PSELIMPLAG YSAAQGQLAL FPAIVAGVVG  60
   61 TMVGALPWYY LGRWLGEDRI LLWLERHGRW LGIRPHELQR SRRWFNRHGR KVVFWGRLIP 120
  121 GIRTLISLPA GFERMRLREF LIYSTLGTTI WVLLLTLAGY KLRRNFALVE QWLAPVSKGV 180
  181 AALLLVLLLV WLSRRWWLAR QRDTAEARRD R

Type	Start	End	Confidence
Cytoplasmic	1	11	0.94
Transmembrane Helix	12	31	0.92
Non-Cytoplasmic	32	47	0.89
Transmembrane Helix	48	71	0.92
Cytoplasmic	72	139	0.95
Transmembrane Helix	140	160	0.94
Non-Cytoplasmic	161	173	0.80
Transmembrane Helix	174	193	0.89
Cytoplasmic	194	211	0.82