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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|81299519, gi|...
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASALLQFWL PPVSFPLAAY DRYDAEAITR YYRRRPWLAI ARLSVIFWNF LGFGWRLLWD  60
   61 QRQQAGDAHL PERAAELRQI LTNLGPTFIK AGQALSTRPD LVRVDFLDEL TKLQDQLPPF 120
  121 PNDQAFEIMA EELGRPVSQS FEELSPEPIA AASLGQVYKG KLFSGETVAV KVQRPNLLPT 180
  181 ITLDLFLIRW AATWFGSLLP LNLGHDLTLI VDEFGYKLFE EIDYENEGRN AERFAENFRD 240
  241 CPYVKAPKIY WAFSSRHVLT LEWIDGVKLT AAAELDQLGI NADAVVKTGV ISGLQQLLEF 300
  301 GFFHADPHPG NLFALPSSPR PDGLGCMAYI DFGMMDQLDQ LTKETLVDAV VHLINRDYVE 360
  361 LAQDFITLGF LTPDSDLTPI IPALESVLGD IMGEKVRDFN FKTITDRFSE LMYDYPFRVP 420
  421 AKFALIIRSL VTQEGLALSV NPDFRIVDVA YPYIAKRLLQ GESPQLRRRL LEVLVKDGKF 480
  481 RWNRLENLIA IAQNDGGFDL LPTAQMGLQY LFSDEGAYLR NQLLLALTEN ERLQTEPLQR 540
  541 LWELLRPELE PARVAGHAFN AFVAFSRDRA AAFFPTLALE SNR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle