YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47214587
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLVGLTGGI ASGKSSVSSM LRELGCPIID ADVVARKVVE PDTPAYSRIV HHFGPEILLE  60
   61 NGEIDRQKLG HLIFASVEKR KLLNSITHSE IQKEMLKEIL FYFIRGYRYV VLDVPLLFET 120
  121 RRLTKFLNHT VVVYCDLATQ LSRLMQRDGL SREQAEQRVA VQMPLAEKRS LASHVIENSG 180
  181 SPEDTRRQVL RLHTKLEDSM DFLPVRVVAV AAAAGLGGIF VFLARLLLS

Type	Start	End	Confidence
Cytoplasmic	1	201	0.56
Transmembrane Helix	202	227	0.83
Non-Cytoplasmic	228	229	0.52