YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|72118581, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMPSSTVVIV GAGQAGLQAA TSLRQAGFDG RIRLVGDEPC IPYERPPLSK SYLAGETGLD  60
   61 GLWLRPEMFY GKERIELELG QTATAIDRQT RQVELASGRK VAYDRLVLAT GARFRPLSVP 120
  121 GAELDGVLPL RTLADADALR PRLAEAREVV VIGAGFIGLE FAAVARKAGV AVHIIEMTQR 180
  181 LMGRVVSEQT SRFYTRAHRD WGSAFLFGTG VARILGNRRV SGVETSDGRT LPADLVLIGI 240
  241 GVVPNTEIAA AAGLAIDNGI IVDQNLASTD PTIFAIGDCA NYPSRFGRCR LESVQNAVDQ 300
  301 GQAVAAAIVG ESIPYDKVPW FWTDQADLKL QIAGITAGHD RSVLRGDPES RSFSVFFFRD 360
  361 GTLIGVESIN RPADHVVARR LLLADPRLSP EQAVDPDFDL RAHAIRFSRR ERAQT

Type	Start	End	Confidence
Signal Peptide	1	19	0.94
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	415	0.98