YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|72121927, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDLIKRYWR TINRPSAYFS LGFLTLGGFI AGVMFWGAFN TALELTNTEQ FCTGCHEMRD  60
   61 NVYQELQGTI HFTNRSGVRA KCSDCHVPHN WTTKMARKMQ ASKEVWGKIF GTINTREKFL 120
  121 AHRLELAQHE WARFKANDSL ECRNCHDYQS MDFTRQSPRA QAMHSTYLEN KEKTCIDCHK 180
  181 GIAHHLPDVS KAGEQ

Type	Start	End	Confidence
Cytoplasmic	1	16	0.96
Transmembrane Helix	17	39	0.93
Non-Cytoplasmic	40	195	0.98