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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47214332
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIFRLTGDL SHLAAIIILL LKIWKTRSCA GISGKSQVLF ALVFTSRYLD LLTSFISLYN  60
   61 TTMKIIYIGC AYATVYLIYL KFKATYDGNH DTFRVEFLVV PVGGLAFLVN HDFSPLEILW 120
  121 TFSIYLESVA ILPQLFMISK TGEAETITTH YLFFLGLYRA LYLINWVWRF YFEGFFDMIA 180
  181 IVAGIVQTIL YCDFFYLYIT KGAKDKCFDR LIKRNQRRGG VAEDLETPLS ISHYHLILLP 240
  241 VGDASDREQD AVSGPLREQE LEPINALISP APPTTESNLK EPTLKEVEEV DKLHLNRTCF 300
  301 EYGRQHVDPK KNDESKNLHK CDKCREAFRY KVALEKHNQT HSALYCDVCR KLILELCRSD 360
  361 ETANLQVIQP HLDRMQDLQT LWNREHNQNS LQTVNVEQGG SQPQFMSLVQ NLLRDPNERS 420
  421 NFFQIGSLLS DTSSILGDCM ETFSQAQDLK ILLGTQKDLS QLDDIESYIV DSAILSTLCL 480
  481 PPVERVVLVN EQAETEAGGG LLYTVCTEME VESDMKEVFA EGSENAQVCM QTQWFGLDND 540
  541 VKSEIDGDVA KSLKAGEVEP AQKHQDGQSG TLIIGEDGQH KCSGATKAKE SSKGKDDESG 600
  601 VDDGEHSSSA VPRETAQEEP LDGTDQHPDN WLSEGERTSQ EFQKSPDGNK SLLEGPFYCP 660
  661 HCSAEFKCKQ TFRFHMRNIC YNEQQVDPDR PVDVKHCFRC DECDKAFRYK STLDSHKQTH 720
  721 NPLYCEVCMK LVRDTDALEM HRESHTPFQC NQCEANFPVF KALHKHYIDV HNPTEPFTCT 780
  781 HCQTTFGSLK RFIRHEWKHT GYQPFQCSTC TKRFRSYSDL VEHHKKHTKA YPFLCWECGK 840
  841 KFRHGVTLTR HVERVHHAGE PVTEKALPSF ACPQCGKSFT SRRCLLKHEN FHHKGFPFPC 900
  901 EHCGKGFFGK DALVRHTLIH TGERPFKCDD CDKSFRSSAE LKIHRRYHTG ERPYKCSICQ 960
  961 KGFVQSCFLT LHMRTHTGER PYVCAVCNKG FSSLHGLKRH KRLVHT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle