YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|72117184, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAIVNSVAY REGKRLGTVG IKEIPQALSV PGTFVWLGLH EPDLALLRQV QQSFGLHDLA  60
   61 VEDALDAHQR PKLEAYGDSV FIVLNTAQLI EDEVVVGETH IFVGPNYVVS VRHGASSTYA 120
  121 PVRERCESDP QGLANGPGYV LYALMDFVVD HYMPIVTRLE DTFAELEQDI FRDEFDRAAI 180
  181 ERLYQIKRQV LRLRNSVNPV EDMCGQLIRL HEDLVPKELR AYFRDIEDHA SRLVRTLDVV 240
  241 REMLTTAVQV NLALVTVGQN EVVKRLAGWG AILAIPTVVF SLYGMNFSFM PELKFHYAYP 300
  301 VVIGVTVVAC GALWRRLHRA GWI

Type	Start	End	Confidence
Cytoplasmic	1	265	0.91
Transmembrane Helix	266	287	0.89
Non-Cytoplasmic	288	294	0.83
Transmembrane Helix	295	317	0.89
Cytoplasmic	318	323	0.92