YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47213485
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASPGRQGTA GGGSSGAALS TRGGGGARRM KWALELSLGN TRSRGERQGG QGDVVYPIGY  60
   61 SEKPVPDTSI QETDKNLVEK RCWDVALGPL KQIPMNLFIM YMSGNTISIF PIMMVCMMAW 120
  121 RPIQALMSMS ATFKLLESSS QQWLQGLVYL IGNLLGSALA IYKCQSMGLL PTHSSDWLAF 180
  181 IEPPQRLEIL GGGMVL

Type	Start	End	Confidence
Cytoplasmic	1	97	0.82
Transmembrane Helix	98	121	0.89
Non-Cytoplasmic	122	142	0.78
Transmembrane Helix	143	164	0.83
Cytoplasmic	165	196	0.82