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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68188778, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPRRSELKN YQKEQRDFRS RLAAGAVLVV ICFGILIARF TYLQYTKYDH YQTMAENNRI  60
   61 SLVPIVPNRG LILDRNGVVL AQNSFVYTLE ITPAKVASSV EETIDELAKL IEVSANDRKR 120
  121 FKKLRAQTHS FESIPIRTHL NEDEAARIAV NRFRLPGVEI RSRLFRQYPQ GKSGSHIIGY 180
  181 IGRINDRDLE NLRESGDLSN YKGSDHIGKS GLEQYYEPQL HGVTGFQQVE IDAGGHAVRV 240
  241 LSSTPPIPGN NLILSIDSKL QRIAEEAFGD YRGALVAIEP STGEVLAYVS QPGYDPNLFV 300
  301 DGIDSESWKE LNESLDKPLV NRPLRGVYPP GSTFKPFVAL AGLEAGKRAP PFSISDPGFF 360
  361 TLPGNSHRYR DWKPSGHGTV DIRKAIAVSC DTFFYGLAME LGIEKLTSFV SHFGFGKPSG 420
  421 IDIKGEMSGL LPTPEWKRRR FKQAWFPGET VIVGIGQGYM LATPMQLAQA TAILANNGKA 480
  481 MRPHLVSAIQ ESKSGHIHPI PPEVIDQVSL NPKNVDIVKQ GMMDVTLPGG TAARLGADSP 540
  541 YLMASKTGTA QVVGIKQNEK YNESKMHERH LDHALFITYA PAEDPKIAIA VIVENGRHGG 600
  601 STAGPIARRV MDYYLLGKEP PSEKPAAEDP SVGASVTPEA NTHDE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle