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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91776285, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRINMPVTNN EYFLQDGQSI LSTTDLQGKI TYINQDFIEV SGFTEDELIG SPHNLVRHPD  60
   61 MPPEAFADMW ATLKAGLPWT GMVKNRRKNG DYYWVLANAT PMRQNGNVVG YMSVRVKPSR 120
  121 QQVEQASQIY ARLRENKHHG LKLHRGEILK TDFISRVRRA MQMTLKTQVA VTTIAILLAM 180
  181 VVVIAATFNG LDISFVVGGA LVAMVAMLSL AVSLSNSVIK PLREATDIAN ALASGDLSHK 240
  241 FSASKTDETG MLLRALNQMN VNIVAMITDI RTNMQRINTG VNEIANGNND LSARTESQAS 300
  301 SLEETASSME ELASTVKQNA DNARQANQLV ISASSVAARG GEVIGEVRDR MRLISESANK 360
  361 ISDIIGVIDG IAFQTNILAL NAAVEAARAG EQGRGFAVVA SEVRNLAHRS AAAAKEIKGL 420
  421 ISDSVERVEA GVEFVDQAGT TMTEIVASVR NVTDIMAEIS AASIEQSAGI DQVNHAVNDM 480
  481 DEVTQRNAAL VEESAAAADA LRQDVLQLER AASVFKLGNG RDTPLERDPR AQAKESAPET 540
  541 PPSKVKADVV SSASAKQRVS VAKVNAKPAA IPNATPSRSG IHKKVVGSDL SSDEWEEF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle