YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|53760017, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESPYKGKTG LRRLINAFGY SVDGLAAAYR NEDAFRQEVL MAVIMIPLAI YLGNDAIAKT  60
   61 LMIGSVLLVI IVELLNSAIE ATVDRISLEN HQLAKRAKDI GSAAVLISLI NLVVVWGLLI 120
  121 FG

Type	Start	End	Confidence
Cytoplasmic	1	33	0.82
Transmembrane Helix	34	53	0.70
Non-Cytoplasmic	54	59	0.62
Transmembrane Helix	60	79	0.86
Cytoplasmic	80	99	0.87
Transmembrane Helix	100	120	0.96
Non-Cytoplasmic	121	122	0.81