YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|13810759
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVHKPLRLV VPLLVLIGFL WLIIGSSHET KPNSPYKYKK IKKNDVIPRN LPADHISHYD  60
   61 LNKLASTPMA AYNKERVLIL TPMAKFLDEY WDNLLKLTYP RELIELGFIV PRTADGDAAL 120
  121 RKLETAVKKI QNPKNTKDTK FAKVTILRQD TEALDSQSEK DRHAFKVQKQ RRSQMAVARN 180
  181 SLLFTTIGPY TSWVLWLDGD IVETPPTLIQ DLVSHDKPVI AANCYQRYYD EEKKQDAIRP 240
  241 YDFNNWVESE EGLRIASTMG DDEIIVEAYA ELATYRPLMG HFYDPNGDVN TEMQLDGVGG 300
  301 TCLLVKADVH RDGAMFPSFP FYHLIETEGC AKMAKRLGYE VFGLPNYLVY HYNE

Type	Start	End	Confidence
Signal Peptide	1	27	0.77
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	354	0.99