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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68214395, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAIDYQAGA GGGTSEVMEP TQRIVKVRRD YNTWVVNETL EDYALRFTPR SFRKWSIFRV  60
   61 ANTAFGAISF LVLEAIGGTL AVNYGFTNAF WAILAIGLVI FMTGLPISYY AAKFGLDMDL 120
  121 LTRGAGFGYI GSTISSFVYA SFTFILFALE AAIMAYALEL YFDLPLYIGY LVSALVIVPL 180
  181 VTHGVTLVSR IQMITQPIWL FLLALPYVFI IYKDPGVLGR LGEFAGKSGY DSDFNLLMFG 240
  241 TAMAVGMALI PQIGEQVDFL RFMPEKTRKN RFRWHLGVLV AGPGWISLGM LKMLGGALLA 300
  301 YLAVEGARSF EQAVNPNQMY MAGFSQVFSN PEVVLAVTVF FVVISQIKVN MTNAYAGSLA 360
  361 WSNFFARLTH SHPGRVVWVV FNAMIAIILM EMDVFQALEQ VLGLYSNIAI SWITAVVADL 420
  421 VINKPLGLSP KGIEFRRAYL YDINPVGVGA MVIASLLSVA AFFGMFGVEA EAFSALIALG 480
  481 TALVVSPLIA WLTKGKYYIA RRPVSYQPAS GVQRCSICEK QYEVEDMAHC PAYQGAICSL 540
  541 CCSLDARCND LCKPHGRIEY QWQRVMRRVL PDRWVEVMQS GLGHYLLLMA VTLAFLSALF 600
  601 GLIYFHESLT FTGEKEALLP ELRLGYLKVF AALAFVSGII AWWIVLTSES RRVAQEESNR 660
  661 QTNLLQREIV LHKQTDAELQ RARQVAEQAN QAKSRYITGI SHELRTPLNS ILGYAQLLDN 720
  721 DPSIPENRRQ SIRVIRRSGE HLLSLIEGTL DIARIESGKL TFDLRLVRFP EFIQQLVSMF 780
  781 ELQARNKGID FKYELRGELP KVVRIDQKRL SQILINILGN AVKFTRHGGV SFKLRYAREM 840
  841 LHISIEDTGP GIAPEEIEKV FEPFARGSAA AKSNIGGTGL GLTISKMLTE LMGGQLTVRS 900
  901 TLGQGSQFNI RLFLSQVRVP EEIENASMPM PLAYKGQRRR ILVVDNEQVD RELLKNILQP 960
  961 LGFEVAEAAN GRECLQTYVK FKPNVILMDL AMPDMDGWEA SYMIRKVHQS DVPIAIVSAN1020
 1021 AFDKGLENTA GIPASDFIVK PVNVMELLRW IGEQLKLEWV TALGDVVDVD AVSRPVTGEL1080
 1081 EAPPREQRDE LMALIKVGYM RGITRKLDEI GQDGQYETFI AAMRQLAGQF ELEAMQKMLE1140
 1141 EVNDGG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle