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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45527769, gi|...
Protein type: Transmembrane
Type Confidence: 0.69
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSQTTESHY PSPNIQQQKR YDAAEIARYY RSRPWEVIQR AATIIWSFGW FLLHLQWDNW  60
   61 FNPDQDNKQK CATKLRLILT CLGPTFIKVG QALSTRPDLI RPDFLEELIK LQDQLPPFDN 120
  121 KIAFSIIEKS LGISITQAYR EISPDPVAAA SLGQVYRAVL HTGEEVAVKV QRPKLRPILT 180
  181 RDLFLMRWAA CQFGRFLPLN LGHDLTLIID EFGVKLFEEI DYVNEGRNAE KFAANFREDD 240
  241 DVKVPVIYWS YSSDRILTLE WIQGYKLTDP DKIIAAGLDP YAIVRIGVTS GLRQLLEHGF 300
  301 FHADPHPGNL FATLDGRMAF IDFGMMDQLE ENTKETIASS VVQLINQDYN ALARDFVQLG 360
  361 FLTPDTDIDP IIPALERVLG NAIGQSVGDF NFKTITDDFS ELMYEYPFRV PAKFALIIRS 420
  421 LITQEGLALS LDSEFKIVEV AYPYVARRLL TGESAQLRRR LLEVLFKDEK FQWQRLENMI 480
  481 NIARSDGQFD LLPTAQLGLQ YLLSDEGRYL RHQLLLALTE DDRLHTEEVQ RIWALISDDL 540
  541 QPQQLFGVAV KAFQQFSSVG VAAILPKADF N

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle