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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47212512
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LAAILDDQSV CGRGERLALA LARENINSVM EGPARARVEV DIYELQKDSQ YDTTDTMCQI  60
   61 LPKGVVSVIG PASSPASGST VSHICGEKEI PHIKIGPEET PRLPYLRFAS VTLYPSNEDL 120
  121 SLAIGAILRS FSYPSASLVC AKAECLLRLE ELVRRFLISR ETLSVRMLDD NLDPTPLLKE 180
  181 IRDDKVATII IDANASVSYL ILKKASELGM TSAFYKYILT TMDFPLLRLE DIVDEQSNIV 240
  241 GFSMFNTTHP FYLEFIRSLN LSWREGCDLT YPGPALSSAL MFDAVHVVVG AVRELNRSQE 300
  301 IGVKPLSCTS PQIWQHGTSL MNYLRMVEYD GLTGRVEFNS KGQRTNYTLR ILEKHRGGHK 360
  361 EIGIWYSNNT LAMNSTSLDI NVSETLANKT LIVTTILENP YVMRKDNYQD FQGNDQYEGF 420
  421 CVDMLREVAD ILKFSFKIKL VDDGLYGAPE PNGSWTGMVG ELINRKADLA VAAFTITSER 480
  481 EKVIDFSKPF MTLGISILYR VQLGRKPGYF SFLDPFSPAV WLFMLLAYLA VSCVLFLAAR 540
  541 LSPYEWYNPH PCLRENRDML ENQYTLGNSL WFPVGGFMQQ GSEIMPRALS TRCVSGVWWA 600
  601 FTLIIISSYT ANLAAFLTVQ RMEVPIESPD DLADQTNIEY GTIHGGSTMT FFMNSRYQTY 660
  661 QRMWNYMKSK QPGVFVKSTE EGIARVVNSK YAFLMESTMN EYHRGLNCNL TQIGGLLDTK 720
  721 GYGIGMPLGS PFRDEITLAI LQLQENNRLE ILKRRWWEGG QCPKEEDHRA KGLGMENIGG 780
  781 IFVVLICGLI IAVFVAIMEF VWSTRRSAET DEASVCQEMI TEFRNAVSCK KSSRIRRRRP 840
  841 LGGSAALRHP ARIALGAPRP LRLVREMRLS NGKLYSGSGP LTCGVGGAGG PDLGPGPQRI 900
  901 LDDPLGANTT PPPPAPTPVM LPARGCTHVR ICQECRRIQN LKTASSIGSA TTRIPPSSAP 960
  961 LPRLPPPPP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle