YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46119817, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIDPEKEQS NSSSNTNNSI WQTVWENVQI LVIAVILAFI IRTFIAEPRY IPSESMSPTL  60
   61 ETGDRLVVEK VSYYFHPPQT GDIIVFEPPT QLQMQGYEKE QAFIKRIIGT GGDIVAVENG 120
  121 IVYVNNTPLE ENYILESPNY NLDSVQVPEG YLFVMGDNRN NSNDSHIWGF LPEKNVIGHA 180
  181 IFRFFPWPRI GSILSTIN

Type	Start	End	Confidence
Non-Cytoplasmic	1	26	0.66
Transmembrane Helix	27	46	0.86
Cytoplasmic	47	198	0.62