YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|53735127, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKLLNIAKI IDTINEWVGK LTYWLLLLMI LVGVWNVIGR YLGRLIGQNL TSNAFIEVQW  60
   61 YLFDIVFLLG AAYTLKHDEH VRVDLFYKDW SPKRKALANF IGVFIFLIPF CLMIIYYSWG 120
  121 NIINSWKILE MSPDPGGLPR YPIKSMIIVS YVLLIFQGIA EAIKNWAIFT GKLNPQEEHH 180
  181 DPSV

Type	Start	End	Confidence
Cytoplasmic	1	20	0.94
Transmembrane Helix	21	39	0.98
Non-Cytoplasmic	40	57	0.83
Transmembrane Helix	58	75	0.93
Cytoplasmic	76	95	0.93
Transmembrane Helix	96	119	0.92
Non-Cytoplasmic	120	140	0.94
Transmembrane Helix	141	160	0.86
Cytoplasmic	161	184	0.86