YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67855521, gi|...
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQSTLGPDT PTADTITIDV QPRHIPRGHS EDLGPINDMS PESWQYSPET INDYYRKRLL  60
   61 QVIRRLINVF LLFASFALGL WWDKIRGKNP KEERKRAIHL REMLTELGPT YIKVGQALST 120
  121 RPDLVPPVYL DELTTLQDQL PSFPNEVAYS FIEEELGQKP QNIYAELSDK PIAAASLGQV 180
  181 YKGKLKTGEK VAVKVQRPDL IKRITLDIYI LRNLSTWAQK TFTFLRSDLV AITDELAGRI 240
  241 FEEINYIQEG KNAEEFAKFY GHLSEIYVPK IYWEYTGRRV LTMEWVEGTK LTNIQEIQAQ 300
  301 GIEATHLVEV GVNCSLRQLL EHGFFHADPH PGNLLAMKDG RLAYLDFGMM SRIKPYQRYG 360
  361 LIEAVVHLVN RDFDALAYDY VKLDFLKPET DLTPIVPALT EVFGNALGSS VAELNFKSIT 420
  421 DQMSEMMYEF PFKVPAYYAL ILRSMVTLEG IAIGIDPEFK VLSKAYPYVA KRLLTDPSPE 480
  481 LRASLKDLLF KEGGFRWNRL ENLMRNAKDS QDYDIDKVVD QAADFLFSAR GEFIRERLVN 540
  541 EITNALDMFS RRTWFNMSSM VREQVGLAVQ ETPQDLQGNS ESFEHLQNIL QILQNTPGFD 600
  601 PMKVVPLIMK LLGKPETQQM GHKIAEGLVQ KLVTRLVRNL LLEIDRPSDN NLGTINTQKS 660
  661 LPAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle