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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67855256, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.37
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLDFSPIWI SLKTAALATT IAFFLGAIAA RTMFKYRGKV KGLIDGILTA PLVLPPTVVG  60
   61 FFLLLLLGKY GPIGKFLRLF DITVIFTWYA AVIAATVVAF PLMYKTALGA FQQIDTNLLA 120
  121 SARTLGATEW QVFRRILLPL ARPGLISGVL LAFARALGEF GATLMLAGSI PGKTQTVPIA 180
  181 IFFAAESGDM TEAMLWVSVM LVLSLSIVVG VNYWNDHRPH QRRAKQSKQG HLTLIDETLL 240
  241 PWDNPVAPLT WDSTRTNVLP SPIELIVDIQ KKLPGFTLDV SFSSNQLPLG LLGGSGAGKS 300
  301 FILRCIAGLE TPDEGCIILN GRVLFDSRRG INVPIRDRRV GFLFQNYALF PHLTVAQNIA 360
  361 FGLPKTLSPR AIRQRVEKQL LAVQLHGLGD RYPQELSGGQ QQRVALARAL ASEPDILLLD 420
  421 EPFSALDTYL RDQLKKLLRL SLTHFPGATL FVSHNLEEAY RICPNLLILD EGEIIAQGPK 480
  481 QDIFDAPQYF RVAQLTGCKN FSRAVIQSEN TITALDWGCT LRVNEPIPDG LAHVGIRAHH 540
  541 LIFTGLKEQQ TRSPENIFPA WLTTISETQH RMTLYLKLNS SPSSPFDYHL QVEVFKDTWN 600
  601 RLQYLPQPWQ IQLYPSRLLL LQNKNSSLSF EYHPSHLSTI TKDD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle