YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|531458, gi\|74...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEFFEQVEE IRGFIDKIAE NVEEVKRKHS AILASPNPDE KTKVELEELM SDIKKTANKV  60
   61 RSKLKSIEQS IEQEEGLNRS SADLRIRKTQ HSTLSRKFVE VMSEYNATQS VYRERCKGRI 120
  121 QRQLEITGRT TTSEELEDML ESGNPAIFAS GIIMDSSISK QALSEIETRH SEIIKLENSI 180
  181 RELHDMFMDM AMLVESQGEM IDRIEYNVEH AVDYVERAVS DTKKAVKYQS KARRKKIMII 240
  241 ICCVILGIVI ASTVGGIFA

Type	Start	End	Confidence
Cytoplasmic	1	236	0.98
Transmembrane Helix	237	258	0.94
Non-Cytoplasmic	259	259	0.99