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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67853792, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNQSKKLHF FPLLGIILTT TTVWVAERPL RGQNVPSVAS IKDPEATDFE FLENLTWDSQ  60
   61 TDEYSTEVEP YTKVSDIKEG VSSPVKSQDG VKEPIARDSS PIILEDPWLE ESRGTIDPYP 120
  121 RVSTIQATTE VVATEDNHPN LSDAWLEESS EAINPYPRVS QLKEVQPSPE PPSQSSTAPP 180
  181 NHEGLAPQLT VDTVSQANLG EAIAPELTQP PEIVQETIPL ELTQPAEIAQ ETTPPSNGED 240
  241 IQDRDIPVVP TPEVIPAPEG ETEEIETSEQ EPRVLVVEVV VEGAERELEN LVYNTIQTRP 300
  301 GRTATRSQLQ EDVNAIYATG FFANVEVTPA DTPLGVRITY AVEVNPVLEQ VVVSTVPDVE 360
  361 DERALPPEKV QEIFGEQYGK TLNLRDLQEG IGAINEWYAE QGFDLAQVIG SPEVSEDGIV 420
  421 TLVIAEGVIE DIQVRFFDPE DEPLDGRTRD FIVTREMQLK PGTVFNRRTA QFDLQRIFGL 480
  481 GLFEDVRVSF SPGEDPREVI VNVDVVEGNT GSLAAGTGIS SSSGLFGTIS YQEQNLGGNG 540
  541 QTIGGEVQVG ERELLLDVSF TDPWIAGDPF RTAYTVNGFR RRTISLVFDG DDSSIRTLNG 600
  601 FDSPRVIRTG GGVSFARPIA DNPFTKPDWR LTAGVNYQRV QIENADGDIA PLSAPLNGFP 660
  661 EQPLAFSDSG RDDLLTLSFA AAQDFRNNPL RPTSGYVLRL GVEQTLPVGS GSVTFTRLRG 720
  721 NYSYFLPLDF IDLGFIEEDQ PKPQALAFNV QAGTVLEDLP PYEAFVVGGS NSVRGYAEGE 780
  781 VGNGRSYFQA TAEYRFPIIP AVGAALFFDY GTTIKSQRSV RGIPGVVRGL PSDGYGYGLG 840
  841 VRIQSPVGPI RVDYGINDDG DSRIHFGIGE RF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle