YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67853691, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRKHFLALT LASFVTACTS SNPNPKAPSK VTLTISVAAS LQDVMKAVKN IYQLENPNLE  60
   61 IIYNFGSSGS LQQQIEQGAP TDVFISAAPK QMNVLEKRGL LLTQTRQNLL TNNLVLITPK 120
  121 DSTTSVTFET LSTADLEKIA LGDPDSVPAG QYGKQVFNSL KAYDKLTPKL VYGKSVRQVL 180
  181 FYVETGNVDA GIVYATDATI SSKVKVTDTA PEDSHSPIIY PIAVIKESKK TEESQKFIDF 240
  241 LLSEKGQSVF ADYGFTKPEN

Type	Start	End	Confidence
Signal Peptide	1	20	0.98
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	260	0.99