YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|144978581, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPFWYSNSKL IWLLSPFSLL FWLISQLRRA LFSLGLKSSY RAPKPVIIVG NLSVGGNGKT  60
   61 PVVVWLVEEL KKRGFRVGVI SRGYGSKSKT YPLFVTENTH PIEAGDEPVL IAKRTNVPVV 120
  121 ISPNRQQAIE LLLSQAECDI IVSDDGLQHY QLQRDLEIVV MDAERALGNG FVLPAGPLRE 180
  181 LPSRLKSVDF VITNGGKNQY SDAVMRLVPH FAINLKTNEK RQLNEFQSGV AIAGIGNPQR 240
  241 FFSMLEKLGI QLKQTQAFQD HQHFEASQLE KLSENQPLFM TEKDAVKCQS FAKDNWWYVP 300
  301 VDAEIIEAEK QRENLPLFWA KIDKLVEQYR NG

Type	Start	End	Confidence
Signal Peptide	1	30	0.81
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	332	0.96