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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68250004, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.32
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKNLVLWVV VAVIMMTAYQ SFNSSSVENS TDYTTFVYDV SNGQVTAARF DANEITVTKT  60
   61 DGSKYSTVMP PLEDKKLLDD LLSKKVKVEG TPFERRGFLS QILISWFPML FLVGVWVFFM 120
  121 RQMQGGGGKA MSFGKSRAKM LNQDQIKVTF ADVAGCDEAK EEVGEIVDFL RDPNKFQNLG 180
  181 GKIPKGILMV GPPGTGKTLL ARAIAGEAKV PFFTISGSDF VEMFVGVGAS RVRDMFEQAK 240
  241 KNAPCLIFID EIDAVGRQRG AGLGGGHDER EQTLNQMLVE MDGFSGNDGV IVIAATNRPD 300
  301 VLDPALTRPG RFDRQVVVGL PDVKGREQIL KVHMRKVSVA QDVDAMTLAR GTPGYSGADL 360
  361 ANLVNEAALF AARVNKRTVT MLEFEKAKDK INMGPERRTM IMTDKQKEST AYHEAGHAIV 420
  421 GYLVPEHDPV HKVTIIPRGR ALGVTFFLPE GDQISISQKQ LESKLSTLYA GRLAEDLIYG 480
  481 EENISTGASN DIKVATNIAR NMVTQWGFSE KLGPILYTED EGEVFLGRSM AKAKHMSDET 540
  541 AHAIDEEVRA IVNRNYARAR EILIDNMDIL HAMKDALVKY ETIEEEQIKQ LMNREPVTPP 600
  601 SGWGEPKTQQ AAYANSTTND TKPESAVENT DNFNV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle